To goal of this two-part tutorial is to demonstrate how to implement an SIR epidemiological model in the pomp R package in part 1, and then estimate the unknown parameters in part 2. The tutorial is designed to focus on the R code. Parameter estimated: This tutorial gives a specific example of estimating the transmission and testing probability parameters using pomp.
Additional Resource Information:
This tutorial is not designed to be published.
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- Parameter estimation
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